PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0058s0115.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family LBD
Protein Properties Length: 215aa    MW: 23439.9 Da    PI: 8.8524
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0058s0115.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260119.61.7e-3723120198
               DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                          aCaaCk++rrkCa++C+lapyfp+e++++f  +hklFG+sn+lk lk++p+  r++am s++++Aear  dPv G+++v+ +l +q+e  
  Kaladp0058s0115.1.p  23 ACAACKYQRRKCAPGCPLAPYFPSERASEFMSAHKLFGVSNILKALKKVPPGARDAAMISIMFHAEARRADPVGGCYAVVESLVKQIEVY 112
                          7***************************************************************************************** PP

               DUF260  91 kaelallk 98 
                          +ael+++ 
  Kaladp0058s0115.1.p 113 QAELDHVM 120
                          ***99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MNSNLKIPDN YSRSSALTSQ SQACAACKYQ RRKCAPGCPL APYFPSERAS EFMSAHKLFG  60
VSNILKALKK VPPGARDAAM ISIMFHAEAR RADPVGGCYA VVESLVKQIE VYQAELDHVM  120
REVYAFRALA AAQAEPRLVP GHVPRADVSV NNVGCQIKLE KQSSSMADEK QFYRTVETTP  180
FDGKGAEACL VRLGENWKPA FAAHDVGLKI FTNT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13850.19e-41LBD family protein