PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0058s0199.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 208aa    MW: 22899.4 Da    PI: 9.0077
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0058s0199.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.41.7e-10249454
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                         +h ++Er+RR+++N+ +  Lr+l P+    + kK + a+i   ++e++k+L
  Kaladp0058s0199.1.p  2 SHIAVERNRRRQMNEHLRVLRSLTPSF---YIKKGDQASIIGGVIEFVKEL 49
                         89************************9...9******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MSHIAVERNR RRQMNEHLRV LRSLTPSFYI KKGDQASIIG GVIEFVKELH QVLQVLDSKK  60
RRKRSLSPSS NPSPRPLLQL CTPSSDSSPS PRLQQGFKEL GACSNSLVAD VEAKLSGANV  120
VLRIVCRRAG GQVGKIVSVL ERLCFDVLQL NISSMEDTVL YSIVIKIGLE CQLSVEELAH  180
VIQKSLYQDE IATASDNATD TLLANYL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15963KKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.11e-72bHLH family protein