PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0058s0300.3.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family TCP
Protein Properties Length: 281aa    MW: 30388.9 Da    PI: 8.5314
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0058s0300.3.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP108.59.7e-3458259298
                  TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......................... 65 
                          a+kk +++++h kv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++t                            
  Kaladp0058s0300.3.p  58 APKKGPTKDRHIKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATAGlhqkldeyggsslnrsnwtmvsgghh 147
                          789***********************************************************9988888887777666666666666665 PP

                  TCP  66 ..........................ssssaseceaesssssasnsssg......................................... 88 
                                                    +                     +                                         
  Kaladp0058s0300.3.p 148 lgasnlwphqaqvsglgfqipppppaN---------------------Tgpagganlagsegsnylqkigfsgfempqgnighmsftsfl 216
                          555555555555555555444333331.....................022222222222222234444444555555555555555555 PP

                  TCP  89 .................................kaaksaaksk 98 
                                                            + + +++++
  Kaladp0058s0300.3.p 217 snqqmpglelglsqdghigvlnpqalnqiyhqmGHGRMHHQQQ 259
                          5555566666666666666777777766665553333333333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MDPKKQPAAA AAMAETNHIN SSNNTSKMMI QQGGEGKEQQ LQIGISEKSD SSKKQLLAPK  60
KGPTKDRHIK VEGRGRRIRM PALCAARIFQ LTRELGHKSD GETIQWLLQQ AEPSIIAATA  120
GLHQKLDEYG GSSLNRSNWT MVSGGHHLGA SNLWPHQAQV SGLGFQIPPP PPANTGPAGG  180
ANLAGSEGSN YLQKIGFSGF EMPQGNIGHM SFTSFLSNQQ MPGLELGLSQ DGHIGVLNPQ  240
ALNQIYHQMG HGRMHHQQQQ QQQQHQEHSP AKDDSQDSEQ *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27010.11e-56TCP family protein