PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0058s0347.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 268aa    MW: 30379.8 Da    PI: 7.1465
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0058s0347.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.81.2e-183279148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         rg WT eEd++l ++v+ +G+g+W++Ia++ g++R++k+c++rw +yl
  Kaladp0058s0347.1.p 32 RGLWTDEEDKILMEYVEVHGKGQWNRIAKKTGLKRCGKSCRLRWVNYL 79
                         788*******************************************97 PP
2Myb_DNA-binding612.6e-1985130148
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                          rg++T+eE++l+++++k+lG++ W++Ia +++ gRt++q+k++w+++l
  Kaladp0058s0347.1.p  85 RGNFTEEEEDLIIRLHKLLGNR-WSLIAGRVP-GRTDNQVKNYWNTHL 130
                          89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MPLFELLVFA LHQSKRGEEM EGGGGVSHQY RRGLWTDEED KILMEYVEVH GKGQWNRIAK  60
KTGLKRCGKS CRLRWVNYLS PNVKRGNFTE EEEDLIIRLH KLLGNRWSLI AGRVPGRTDN  120
QVKNYWNTHL SKRNGSTKRP RTESYTPNPD TKSPARSKDS ETMTAGAFVS LDPLRNNTGS  180
TTENPEQETT AAAALTTVNN VLLDASFSLQ NADAFLADGQ PQHYASSSQT WRDQMEQQMQ  240
MSSYQSLVQF SDEFLQFDFG WSSLFSD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14750.11e-68MYB family protein