PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0058s0537.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NAC
Protein Properties Length: 258aa    MW: 29342.9 Da    PI: 6.5047
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0058s0537.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM160.95.1e-50111471128
                  NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiykvePwdLp.k....kvkaeekewyfFskrdkkyatgkrknratks 80 
                          +ppGfrFhPt+eelv +yL+kk++ +      ++  +vi ++d++++ePwd+  k     +++eekewyf+s++ kky+tg+r+nrat++
  Kaladp0058s0537.1.p  11 VPPGFRFHPTEEELVGYYLRKKISMNGnvideCDYLNVIIDIDLCTMEPWDILgKcsqgGAYEEEKEWYFYSHKGKKYPTGSRTNRATAA 100
                          69*********************999967666666669**************74445554445889************************ PP

                  NAM  81 gyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                          g+Wkatg+dk+vls +++++g++ktLvfy+grap+g+ktdW++heyrl
  Kaladp0058s0537.1.p 101 GFWKATGRDKAVLS-RHQVIGMRKTLVFYHGRAPNGKKTDWIIHEYRL 147
                          **************.999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
METLSTSSTC VPPGFRFHPT EEELVGYYLR KKISMNGNVI DECDYLNVII DIDLCTMEPW  60
DILGKCSQGG AYEEEKEWYF YSHKGKKYPT GSRTNRATAA GFWKATGRDK AVLSRHQVIG  120
MRKTLVFYHG RAPNGKKTDW IIHEYRLQAY EHGPPQEEGW VVCRAFKKPS PNQQRFSSFL  180
YHADPQLSYT AITPSVSQQQ FHTPSYNFKE YGGCNNQVEL GPEIDGSISA KECLGTDWDQ  240
LSQLQVFPSN LPFDIDV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.19e-86NAC family protein