PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0058s0582.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 368aa MW: 41083.6 Da PI: 6.7835

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0058s0582.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.9	2.1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +++++G+g+W++++ g+ R+ k+c++rw +yl Kaladp0058s0582.1.p 14 KGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	48.7	1.7e-15	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++++E++ ++++ ++lG++ W++Ia++++ Rt++++k++w+++l Kaladp0058s0582.1.p 67 RGNFSEQEEKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MGRPPCCDKV GVKKGPWTPE EDIILVSYIQ EHGPGNWRAV PTNTGLLRCS KSCRLRWTNY 60 LRPGIRRGNF SEQEEKMIIH LQALLGNRWA AIASYLPQRT DNDIKNYWNT HLKKKLRKIQ 120 SGGGDEIVGG QKSQPNQETS FCKGQWERRL QTDIHTAKQA LCEALSVDNN LGNNPTRLVA 180 QSDSSNPFCP NSFSPPATLL TQTTATSSSS SSGVYASSTE NISKLLQNWM KKTPSSAAKS 240 ELSDHNDRFR FSITNKLQLP KQEFGPTRSS SSSDGSLSAT TTGAFDSIFR MHNSDDENNA 300 NFGQDHQSTS LFHDADYKPD MEHGQFQLQQ QDEMPLTLLE KWLFDDVNAP SQGLMDISPL 360 EESSEFF*

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MGRPPCCDKV GVKKGPWTPE EDIILVSYIQ EHGPGNWRAV PTNTGLLRCS KSCRLRWTNY  60
LRPGIRRGNF SEQEEKMIIH LQALLGNRWA AIASYLPQRT DNDIKNYWNT HLKKKLRKIQ  120
SGGGDEIVGG QKSQPNQETS FCKGQWERRL QTDIHTAKQA LCEALSVDNN LGNNPTRLVA  180
QSDSSNPFCP NSFSPPATLL TQTTATSSSS SSGVYASSTE NISKLLQNWM KKTPSSAAKS  240
ELSDHNDRFR FSITNKLQLP KQEFGPTRSS SSSDGSLSAT TTGAFDSIFR MHNSDDENNA  300
NFGQDHQSTS LFHDADYKPD MEHGQFQLQQ QDEMPLTLLE KWLFDDVNAP SQGLMDISPL  360
EESSEFF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47600.1	8e-99	MYB family protein