PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0058s0639.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 228aa    MW: 24866.3 Da    PI: 8.8171
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0058s0639.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.000184264123
                         EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                         ++C+ Cgk F++   L  H  +H
  Kaladp0058s0639.1.p 42 FECKTCGKKFPTFQALGGHRASH 64
                         89**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MSLSNHETSS TLTEETAASC LMLLSKVGEY SKTPKDENNK EFECKTCGKK FPTFQALGGH  60
RASHKKPKLE SDSSQLTKQS MMTTPAKPKS HECAICGAEF ALGQALGGHM RRHRDVAGVN  120
GVVFGSKMGE TPSGATTAVQ ASEIPAVLKR SKSKRVCLEL DLNLTPREND LQMESSDSEV  180
GSDLKLQLGK REYEVRAEVG RLQEYDLRMQ IGKRRRFGDG FLGLVAL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1149155KRSKSKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59820.11e-34C2H2 family protein