PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0058s0641.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 251aa MW: 28863.2 Da PI: 6.372

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0058s0641.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.9	8.6e-17	8	55	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed ll+++v+++G ++W+ +a+ g++Rt+k+c++rw +yl Kaladp0058s0641.1.p 8 KGPWTEQEDYLLANVVNLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYL 55 79********************************************97 PP
2	Myb_DNA-binding	53	8e-17	61	106	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+ E+ l +++++++G++ W++Iar+++ gRt++++k++w++++ Kaladp0058s0641.1.p 61 RGKMTAHEERLVLELHAKWGNR-WSRIARKLP-GRTDNEIKNYWRTHM 106 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
MATEEIRKGP WTEQEDYLLA NVVNLFGDRR WDFVAKVSGL NRTGKSCRLR WVNYLHPGLK 60 RGKMTAHEER LVLELHAKWG NRWSRIARKL PGRTDNEIKN YWRTHMRKKA QEQKQTITPS 120 TALSDSSSSS NPTQESLSPD REKESFYDAV GFDAEFSLNG NKQAEELVDR VYSMDDIWED 180 IDKAKESHIS QLYNSFNEGS SLYCPMTVSP VRDYCSGSLW KMDDGESKMF LPSTNQFPSY 240 YDLSEAPSYG *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59780.3	1e-83	MYB family protein