PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0059s0026.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 261aa    MW: 28138.6 Da    PI: 7.3453
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0059s0026.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.81.6e-1273120355
                          HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          r+h e+E+rRRdriN  + +Lr+l+Pk+      K++Ka+ L  +++ +k Lq
  Kaladp0059s0026.1.p  73 RSHTEAEKRRRDRINGHLLTLRKLVPKS-----DKMDKAALLACVIQRVKGLQ 120
                          78*************************8.....7************9999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MENFRCSGWF EAGDFAHSQS QMTAGFSSSE PLQATGDTGM FSSVQLQGLP SYWPGFEDGF  60
GDGRAAAAAS SSRSHTEAEK RRRDRINGHL LTLRKLVPKS DKMDKAALLA CVIQRVKGLQ  120
GEAAEVGKAL TVPTDVDEVR ISTYAAAAES TSGSQTDIFM EASLCCEDRP ELFAEIDQAL  180
QSLNLSTARV EMGSLGGRVR IILLLSGNGI RNDSCSTQNR MINLKGSLNV ALNRIVNSTP  240
SVSSYRVTSK RQRFFLPSDT *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.14e-43bHLH family protein