PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0059s0055.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 270aa MW: 30813.7 Da PI: 9.5661

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0059s0055.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.3	4.7e-10	21	66	3	46
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 WT eE +l+ a + + ++ +W+++a++++ g++ k+++s + Kaladp0059s0055.1.p 21 YWTREENKLFESALAIYDKNtpdRWEKVAQMIP-GKSVKDVISQYKE 66 6******************************.*******9975 PP
2	Myb_DNA-binding	42.2	1.9e-13	119	164	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++WT++E+ +++ + ++G+g+W++I+r + +t+ q+ s+ qky Kaladp0059s0055.1.p 119 LPWTEDEHRRFLMGLLKHGKGDWRSISRNFVASKTPTQVASHAQKY 164 69***************************99**********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence
MYQTFQLQNS NWLPQKSHSS YWTREENKLF ESALAIYDKN TPDRWEKVAQ MIPGKSVKDV 60 ISQYKELEDD VINIEAGLVP TPGYLTSSFT LELGDDRDFD VLRKKSRARS ADREKKKGLP 120 WTEDEHRRFL MGLLKHGKGD WRSISRNFVA SKTPTQVASH AQKYFLRLNS GLKDKRRPSI 180 HDITTTNLSN APPSHDSGLA AFDQFVVLPP REKEQNVALD WNQHGNLSVM GFEPNLPPAP 240 YESLYGYGIH VGSHNPMFEV QSARQRIRG*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	103	117	RKKSRARSADREKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38090.1	7e-83	MYB family protein