PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0059s0088.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 171aa MW: 19823.4 Da PI: 8.9379

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0059s0088.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.2	2.5e-10	26	71	3	46
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 WT eE +l+ a + + ++ +W+++a++++ g++ k++++ + Kaladp0059s0088.1.p 26 YWTREENKLFESALAIYDKNtpdRWEKVAQMIP-GKSVKDVINQYKE 71 6******************************.*******9975 PP
2	Myb_DNA-binding	31.2	4.9e-10	124	158	2	36
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS- CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRt 36 ++WT++E+ +++ + ++G+g+W++I+r + +t Kaladp0059s0088.1.p 124 LPWTEDEHRRFLMGLLKHGKGDWRSISRNFVASKT 158 69**************************9875555 PP

Sequence ? help Back to Top
Protein Sequence Length: 171 aa Download sequence
MIMDTMYQTF QLQNSNCLPQ KSHSSYWTRE ENKLFESALA IYDKNTPDRW EKVAQMIPGK 60 SVKDVINQYK ELEDDVINIE AGLVPTPGYL TSSFTLELGD DRDFDVLRKK SRARSADREK 120 KKGLPWTEDE HRRFLMGLLK HGKGDWRSIS RNFVASKTPT QSYSEQNRLI *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	108	122	RKKSRARSADREKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38090.1	2e-63	MYB family protein