PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0059s0310.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NF-YB
Protein Properties Length: 174aa    MW: 18869 Da    PI: 5.3791
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0059s0310.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB182.73.1e-5718113297
                NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyr 91 
                          reqdr+lPianvsrimkk+lPanakisk+aketvqecvsefisf+t+eas+kcqrekrktingddllwa++tlGfedyveplk+yl+k+r
  Kaladp0059s0310.1.p  18 REQDRLLPIANVSRIMKKALPANAKISKEAKETVQECVSEFISFITGEASEKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKIYLSKFR 107
                          89**************************************************************************************** PP

                NF-YB  92 elegek 97 
                          e+egek
  Kaladp0059s0310.1.p 108 EMEGEK 113
                          ****97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MAESDNESGG QSSNMATREQ DRLLPIANVS RIMKKALPAN AKISKEAKET VQECVSEFIS  60
FITGEASEKC QREKRKTING DDLLWAMTTL GFEDYVEPLK IYLSKFREME GEKMNLGRVP  120
QQGDSGEYGG GGYGGGGGGM GYGMMQQQQQ QMYDGGGYDH GAGRRVSTGR SGR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.12e-71NF-YB family protein