PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0059s0312.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NF-YB
Protein Properties Length: 236aa    MW: 25333.5 Da    PI: 6.4193
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0059s0312.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB1757.5e-5558154197
                NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkky 90 
                          vreqdrf+Pianv+rim+k+lP++akis+daket+qecvse+isf+tsea+++cq+e+rkti+++d+lwa+++lGf+dy+epl++yl++y
  Kaladp0059s0312.1.p  58 VREQDRFMPIANVIRIMRKILPSHAKISDDAKETIQECVSEYISFITSEANERCQQEQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRY 147
                          69**************************************************************************************** PP

                NF-YB  91 relegek 97 
                          r++eg++
  Kaladp0059s0312.1.p 148 RDMEGDR 154
                          *****97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MDGGSGGGGF HGFHRFPVHS SPGMKLTTDM NVKLPEIARE GGSSNGTSAA AEDGECTVRE  60
QDRFMPIANV IRIMRKILPS HAKISDDAKE TIQECVSEYI SFITSEANER CQQEQRKTIT  120
AEDVLWAMSK LGFDDYIEPL TLYLHRYRDM EGDRGAIRGD PLLVKRAPPP EYGMVAAGYG  180
AFPAAGFHMG HHHGFFGPPG MGMYYKDMLA NGNGGGPPPA GGGGAAAEPR QSQSK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47670.14e-69NF-YB family protein