PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0059s0348.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

WRKY

Protein Properties

Length: 394aa MW: 42027.5 Da PI: 5.3815

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0059s0348.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.5	5.6e-33	186	243	1	58
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 ldDgy+WrKYGqK vk+s+fprsYYrCts++C v+k+vers+ed +v++tYeg+H+h Kaladp0059s0348.1.p 186 LDDGYRWRKYGQKAVKNSPFPRSYYRCTSPSCGVQKRVERSSEDSAIVVTTYEGQHTH 243 59******************************************************** PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MDGAEDQTAT IDSLLMMSPS FPDQIPASSF SLSGLFDMPP LAASAAPPSA SYSYDIDKSG 60 EGSFLGFSDL LGFQDYCYGA SLFDLIQTSP PLQAVTTTAP SPASTIPETS EVLNGPMTPN 120 SSSNEAAAAA NEEQSEESQG VNGGNTEQED QDRDKTKKQL RPKKKNQKKE MEPRFAFMTK 180 SEIDHLDDGY RWRKYGQKAV KNSPFPRSYY RCTSPSCGVQ KRVERSSEDS AIVVTTYEGQ 240 HTHLSPVMAR GSGITGSLLH HHLDSISSSS CSVQLGVSSL APPPSFPTPS PSSFLNNNAT 300 ANMVSSLSSF INNNPSPPSN HASPSLGRNP FFKERRFCPS PPAAAGHHPP LTSQHITTAP 360 APATAAAAGS SSCLMRDDGL LQDIIMRSDP KEE*

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MDGAEDQTAT IDSLLMMSPS FPDQIPASSF SLSGLFDMPP LAASAAPPSA SYSYDIDKSG  60
EGSFLGFSDL LGFQDYCYGA SLFDLIQTSP PLQAVTTTAP SPASTIPETS EVLNGPMTPN  120
SSSNEAAAAA NEEQSEESQG VNGGNTEQED QDRDKTKKQL RPKKKNQKKE MEPRFAFMTK  180
SEIDHLDDGY RWRKYGQKAV KNSPFPRSYY RCTSPSCGVQ KRVERSSEDS AIVVTTYEGQ  240
HTHLSPVMAR GSGITGSLLH HHLDSISSSS CSVQLGVSSL APPPSFPTPS PSSFLNNNAT  300
ANMVSSLSSF INNNPSPPSN HASPSLGRNP FFKERRFCPS PPAAAGHHPP LTSQHITTAP  360
APATAAAAGS SSCLMRDDGL LQDIIMRSDP KEE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47260.1	1e-40	WRKY family protein