PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0059s0354.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRAS
Protein Properties Length: 577aa    MW: 64060.3 Da    PI: 5.702
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0059s0354.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS286.76.3e-882075744374
                 GRAS   4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetseknsseelaalkl....fsevs 88 
                           Ll++Ae v ++++e+a++lL++ + l+spd+ ++qR+++yfteAL++r+ r +++ +++ ++ +++ + n  e++++ +     f++  
  Kaladp0059s0354.1.p 207 SLLSAAESVGNQQFERASRLLSQCEFLSSPDACTVQRVVHYFTEALRERIDReTGNFTSNYFKEKQACDLN--EAMKYGNPitlsFYQDI 294
                          699*************************************************4455555555555555433..333322214457***** PP

                 GRAS  89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfef 178
                          P+ + sh+t  qaI+e v++++++H iDf++ +G++   L+qaLa+R e   +l+iT+v     +s+ +le tg rL +fA+++++p++f
  Kaladp0059s0354.1.p 295 PLSQASHFTGIQAIVEHVATAKKIHMIDFGLRHGVHSTILMQALAARHEAVEHLKITAVTT---TSRSKLEPTGTRLLSFARTMKIPLSF 381
                          ************************************************************9...689*********************** PP

                 GRAS 179 nvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalf 268
                          ++++  ++ dl+ e ++++ +E ++V   l + +l+    +++++ d++++++k+l P ++v++e ea+hns+ F++rf+eal +ysa f
  Kaladp0059s0354.1.p 382 DIVMIGDMLDLREELFELDGEEEVVVYAPLLMTTLV----AQRDRLDHLMSVLKNLDPCLMVMAEVEANHNSPAFVNRFIEALFFYSAYF 467
                          ***999************************888887....55556777****************************************** PP

                 GRAS 269 dsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgs 357
                          d l++ + +++  ri  E ++++r i+n+va+ega+r+ rh + + Wr+ + ++G+ + ++s  a+ qa+l+l +++ +   +++ + +s
  Kaladp0059s0354.1.p 468 DFLASCMENDNPGRIAAETVFFSRCIRNIVATEGADRTTRHVKIGVWRSYFARFGLVETEFSAAATYQARLVLDQFScGSSCTIDTDGKS 557
                          *****************************************************************************9999********* PP

                 GRAS 358 lvlgWkdrpLvsvSaWr 374
                          l++gWk+ pL s+S W+
  Kaladp0059s0354.1.p 558 LIMGWKGTPLHSLSIWK 574
                          ****************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 577 aa     Download sequence    
MLRDEQYHQS GSHERLISFK GNKGSPKQYR EEEDGRNSGA ADPGSSNLGS LGEGLSSSKY  60
LQQHQQVSNG YGFFDDVNFD VDSPPVQQCF DEMSKLSKLH SETPAVEPRK EAGSSVQYAS  120
LELLNSYGSG VKRLSELRPS PSQARVESSW TRPKLSIDEI LKTAAVNFIS SSSHGVDGSP  180
ILSGAAHGVY FSGLTDDQMT DVELLVSLLS AAESVGNQQF ERASRLLSQC EFLSSPDACT  240
VQRVVHYFTE ALRERIDRET GNFTSNYFKE KQACDLNEAM KYGNPITLSF YQDIPLSQAS  300
HFTGIQAIVE HVATAKKIHM IDFGLRHGVH STILMQALAA RHEAVEHLKI TAVTTTSRSK  360
LEPTGTRLLS FARTMKIPLS FDIVMIGDML DLREELFELD GEEEVVVYAP LLMTTLVAQR  420
DRLDHLMSVL KNLDPCLMVM AEVEANHNSP AFVNRFIEAL FFYSAYFDFL ASCMENDNPG  480
RIAAETVFFS RCIRNIVATE GADRTTRHVK IGVWRSYFAR FGLVETEFSA AATYQARLVL  540
DQFSCGSSCT IDTDGKSLIM GWKGTPLHSL SIWKFM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.14e-44GRAS family protein