PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0060s0003.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 226aa    MW: 25395.1 Da    PI: 8.9142
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0060s0003.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF85.62.9e-27959151
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         +ri+n + rqvtfskRr+g+lKKA+ELS+LCd++v v+ifsstgkly+y+s
  Kaladp0060s0003.1.p  9 ERIDNITSRQVTFSKRRKGLLKKAKELSILCDVQVGVMIFSSTGKLYDYAS 59
                         69***********************************************86 PP
2K-box78.22.1e-2682171998
                K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                          +++++ +++++e+a L  ++++Lq  +R++ Ge+L+ L+++eLq+Le+qLe  lk iR kK+e+l+++ieel++k   +q+en +L+++ 
  Kaladp0060s0003.1.p  82 NSNSDVKYWKNEAATLLHQLQSLQDDHRKIFGEQLSGLTIRELQHLENQLEMNLKCIRMKKDEILIAEIEELRQKGSLIQQENLDLQNQA 171
                          578899********************************************************************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MGRGKIVIER IDNITSRQVT FSKRRKGLLK KAKELSILCD VQVGVMIFSS TGKLYDYASN  60
GSIKTTIEQY NRVKGDKLHL ANSNSDVKYW KNEAATLLHQ LQSLQDDHRK IFGEQLSGLT  120
IRELQHLENQ LEMNLKCIRM KKDEILIAEI EELRQKGSLI QQENLDLQNQ AMCHITNGEM  180
TAALHTDALR CENGTPVQVR LQLSQPQPQS TNSASGTISL GLHLN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14210.13e-70MIKC_MADS family protein