PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0060s0034.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family BBR-BPC
Protein Properties Length: 188aa    MW: 20394.6 Da    PI: 10.9328
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0060s0034.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind234.67.7e-7217187139301
            GAGA_bind 139 eaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesader..........skaekksidlvlngvslDestlPvPvCsCtGa 218
                          +++  + +++k+ k+ ++kkp+++ +k +kk +++s k+ ++ s+  +           k+   + +l+ln+  lD+ +lPvP CsCtG+
  Kaladp0060s0034.1.p  17 TTKARKGKRAKEAKTVSPKKPLKPARKIAKKGTRASSKQLTATSQ--HssddgtsgnlDKQIVLKGGLSLNELGLDDVNLPVPFCSCTGK 104
                          222333333344444555555555555555544444444433333..034667766666666667799********************** PP

            GAGA_bind 219 lrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                          ++ CYkWG GGWqSaCCtt++S+yPLP+++++r++R++grKmS+gaf+kl+ +La+eGyd+  p+DLk+hWAkHGtn+++ ir
  Kaladp0060s0034.1.p 105 PQSCYKWGKGGWQSACCTTALSMYPLPQMPNKRHSRMGGRKMSGGAFTKLITRLASEGYDITVPIDLKNHWAKHGTNRYIIIR 187
                          *********************************************************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MRISFDVFPQ SSAASKTTKA RKGKRAKEAK TVSPKKPLKP ARKIAKKGTR ASSKQLTATS  60
QHSSDDGTSG NLDKQIVLKG GLSLNELGLD DVNLPVPFCS CTGKPQSCYK WGKGGWQSAC  120
CTTALSMYPL PQMPNKRHSR MGGRKMSGGA FTKLITRLAS EGYDITVPID LKNHWAKHGT  180
NRYIIIR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21240.11e-55BBR-BPC family protein