PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0060s0035.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

NAC

Protein Properties

Length: 378aa MW: 43197.3 Da PI: 6.6303

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0060s0035.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	177	5.1e-55	10	138	2	129
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 ppGfrFhPtdeelv +yLkkkv+++k++l +vi+++d+y++ePwdL++ ++e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+ Kaladp0060s0035.2.p 10 PPGFRFHPTDEELVGYYLKKKVAAQKIDL-DVIRDIDLYRIEPWDLQEkcwIGYEEQNEWYFFSHKDKKYPTGTRTNRATVAGFWKATGR 98 9**************************.9***********953543344677**************************** PP NAM 89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 dk+v++ k++l+g++ktLvfykgrap+g+k+dW+mheyrle Kaladp0060s0035.2.p 99 DKAVYD-KRKLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 138 **.999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MDQCVESCIP PGFRFHPTDE ELVGYYLKKK VAAQKIDLDV IRDIDLYRIE PWDLQEKCWI 60 GYEEQNEWYF FSHKDKKYPT GTRTNRATVA GFWKATGRDK AVYDKRKLIG MRKTLVFYKG 120 RAPNGQKSDW IMHEYRLETD ENGPPQAKGW VVCRTFKKRT TTSKPKSIIT GPAWDSSAFF 180 YDESGGSSSV IDSPLDYITR QKHQPLQSTS FLSQNFFCKQ ELELSENNPI ITNNSSLIKS 240 QNHQFVQLPQ LESPSLPVLK RPSSSLSLIS DDNDKNKKNE AYHISSSKVT DWRALDKFVA 300 SQLSQGDNYD IDHPGNQMIP AGFGTLQDEE AFQVTMQNGD KLIFNDGRND RLNNGFYLGS 360 NDRNLESDNT GICIFES*

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MDQCVESCIP PGFRFHPTDE ELVGYYLKKK VAAQKIDLDV IRDIDLYRIE PWDLQEKCWI  60
GYEEQNEWYF FSHKDKKYPT GTRTNRATVA GFWKATGRDK AVYDKRKLIG MRKTLVFYKG  120
RAPNGQKSDW IMHEYRLETD ENGPPQAKGW VVCRTFKKRT TTSKPKSIIT GPAWDSSAFF  180
YDESGGSSSV IDSPLDYITR QKHQPLQSTS FLSQNFFCKQ ELELSENNPI ITNNSSLIKS  240
QNHQFVQLPQ LESPSLPVLK RPSSSLSLIS DDNDKNKKNE AYHISSSKVT DWRALDKFVA  300
SQLSQGDNYD IDHPGNQMIP AGFGTLQDEE AFQVTMQNGD KLIFNDGRND RLNNGFYLGS  360
NDRNLESDNT GICIFES*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18060.1	1e-133	NAC family protein