PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0060s0073.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GATA
Protein Properties Length: 252aa    MW: 27391.6 Da    PI: 7.973
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0060s0073.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA61.78.7e-20125159135
                 GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                          C+nC +t+TplWR+gp g+k+LCnaCG++y+k+++
  Kaladp0060s0073.1.p 125 CANCDATSTPLWRNGPKGPKSLCNACGIRYKKEER 159
                          ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MMHNNMYYSQ SNGGQQPCYD YDYYCSADPY SYHGFDSTSS STSSHVDCTL SLGTPSTRSE  60
AGGEQTKKQS SRRGGSRVSN FCRDLLQQTT SSSSKHSAAQ NGTNSYSKSG RVSGGGRDPL  120
VARRCANCDA TSTPLWRNGP KGPKSLCNAC GIRYKKEERR ASAAASNGSG ASAMESQYAS  180
SEHYYSNQSY THHHQSQKMN CLFPAGANEY HRYVDADEDG GHYEHSGNGG VSFLPWMLNV  240
ADRPSLVHDF T*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.13e-46GATA family protein