PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0060s0084.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRAS
Protein Properties Length: 601aa    MW: 65532.1 Da    PI: 4.8756
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0060s0084.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS347.42.3e-1062356004374
                 GRAS   4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                          ++l+cA++v+s + e+a ++L++l + +s++gdp++R++++f+eAL +r ++      +  +  ++s ++s+e + ++k++++++P+ kf
  Kaladp0060s0084.1.p 235 AVLDCARVVDS-EPERAVNTLTQLLKSVSETGDPIERVTFHFAEALCNRASH------RPGNLLTASGTTSEEFTVSYKALNDACPYSKF 317
                          5789***8887.7889999********************************9......444555555555999***************** PP

                 GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnv 180
                          +hltaNqaIlea+e+++++Hi+Df+i qG+QW+aLlqaLa+R++g+p +++i g+ +p+ g     +l++tg+rL++fA+ l+++fef++
  Kaladp0060s0084.1.p 318 AHLTANQAILEATEKAQKIHIVDFGIVQGVQWAALLQALATRTNGKPsRIKISGIPAPALGpsPVAALSATGNRLSEFAKLLDLNFEFEP 407
                          *******************************************887779*********99999999************************ PP

                 GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfds 270
                           v   +++l+ ++++v+p+E++aVn++lql++llde+    +   +vL+l +slsP +v++ e ea +n+ +F+er+ +al +y+alf+s
  Kaladp0060s0084.1.p 408 -VLAPMSELSESSFKVEPDESVAVNFMLQLYNLLDETPMAVE---TVLRLARSLSPSIVTLGEYEARLNQVPFVERVKNALTHYTALFES 493
                          .7999*****************************99888888...9******************************************** PP

                 GRAS 271 leaklpreseerikvErellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgsl 358
                          le ++ r+s +ri +E+ llg++i  v+  e+   +rer+e    W+  +e+aGF pv+ls++a +qak ll +++ +  y++ e+  ++
  Kaladp0060s0084.1.p 494 LEPNFKRDSADRIQLEKSLLGQRIAGVIGPEEPGvKRERMEDRDGWKLLMESAGFVPVKLSHYAISQAKILLWNYNyNSQYSIVESPPAF 583
                          ******************************999889****************************************9999******9999 PP

                 GRAS 359 v.lgWkdrpLvsvSaWr 374
                          + l W++ p++svS+Wr
  Kaladp0060s0084.1.p 584 LsLAWRELPVLSVSSWR 600
                          99**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 601 aa     Download sequence    
MAYLCGDSGN LMAIAQQIQQ KEQQDQHNLH PIHHQQDHNH YQQQPQPQQL QLVGVNPFAM  60
ANTWTASASQ LGYGLAGSGF PDQFPVAGAD AAGEGMFPFS NPMEFKFTEF DSADWIMEGL  120
IGSGEPPTAG YETWQSQPDF NHLYAADPFA APPPGDLTPL IFSAPSKTDG SVQPQEPICA  180
PLPAPPSPPR PPHVDKEVTV APPPPAPKSQ KTVISRSNTG PSDAEQSTPP PLLIAVLDCA  240
RVVDSEPERA VNTLTQLLKS VSETGDPIER VTFHFAEALC NRASHRPGNL LTASGTTSEE  300
FTVSYKALND ACPYSKFAHL TANQAILEAT EKAQKIHIVD FGIVQGVQWA ALLQALATRT  360
NGKPSRIKIS GIPAPALGPS PVAALSATGN RLSEFAKLLD LNFEFEPVLA PMSELSESSF  420
KVEPDESVAV NFMLQLYNLL DETPMAVETV LRLARSLSPS IVTLGEYEAR LNQVPFVERV  480
KNALTHYTAL FESLEPNFKR DSADRIQLEK SLLGQRIAGV IGPEEPGVKR ERMEDRDGWK  540
LLMESAGFVP VKLSHYAISQ AKILLWNYNY NSQYSIVESP PAFLSLAWRE LPVLSVSSWR  600
*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.11e-174GRAS family protein