PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0060s0100.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 223aa    MW: 25603.2 Da    PI: 6.2873
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0060s0100.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.92.4e-2077128556
                          SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          +++t++q  +Le +Fe+++++ +e++e++A++lgL+ rqV vWFqNrRa++k
  Kaladp0060s0100.1.p  77 RKLTDYQGAQLELYFESEPKLETERKEKIAAELGLEPRQVAVWFQNRRARWK 128
                          6899***********************************************9 PP
2HD-ZIP_I/II102.82.9e-3376165392
          HD-ZIP_I/II   3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                          kr+l++ q ++LE  Fe+e kLe+erK+++a eLgl+prqvavWFqnrRAR+k k+lE +++ L++++    +++++Le++v eLr +l 
  Kaladp0060s0100.1.p  76 KRKLTDYQGAQLELYFESEPKLETERKEKIAAELGLEPRQVAVWFQNRRARWKCKKLEDEFANLRTSHHCALAQKAQLEAQVLELRGRLV 165
                          9************************************************************************************98886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MMTSNMMMMM PMNDDHNFPV QGDDDQLMMF LSSQQQQCLF DPLLCPKTED QPSKVKKQRK  60
RKPKNRGGEN GAGQGKRKLT DYQGAQLELY FESEPKLETE RKEKIAAELG LEPRQVAVWF  120
QNRRARWKCK KLEDEFANLR TSHHCALAQK AQLEAQVLEL RGRLVEAESE LQRLSARCES  180
GISVENTSPP ASSQSMEGVQ LLDNGCVQVM DYYWMNNLYE MM*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15966RKRKPKNR
25978RKRKPKNRGGENGAGQGKRK
36079RKRKPKNRGGENGAGQGKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18550.12e-38HD-ZIP family protein