PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0060s0169.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 190aa    MW: 21509.2 Da    PI: 9.7051
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0060s0169.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.89.3e-09105145954
                          HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                           r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  Kaladp0060s0169.1.p 105 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 145
                          699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MDASMELMMT MMQSDTGRRH HTADFVVHPQ PPPPPHHFPL SELHNPGYAA LPQMSELERQ  60
SSMAAMREMI FRIAAMQPVQ IDPEAVKPPK RKNVRISKDP QSVAARHRRE RISERIRILQ  120
RLVPGGTKMD TASMLDEAIH YVKFLKKQVQ SLERAGVAAA GFEEFPVRVM EGQMMMMGMG  180
CVQQQQMMC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.13e-45bHLH family protein