PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0060s0202.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRAS
Protein Properties Length: 462aa    MW: 51276.5 Da    PI: 6.1149
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0060s0202.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS310.92.8e-95594572373
                 GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.sseelaalkl..fsevs 88 
                          ++lL++cA+a++++d++laq++L+ l+++a+ dgd++qRl+  f++AL +r ar  ++ +k+l++  +++ +  ++++++ +l  f++++
  Kaladp0060s0202.1.p  59 EQLLVHCATALETNDATLAQQILWVLNNIAAADGDSNQRLTCGFLRALVSRAAR--TGSCKILTAAINTTASlAVHKFSVIELasFVDLT 146
                          79****************************************************..44444443333332222566666666677***** PP

                 GRAS  89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvp 175
                          P+++f++ +aN aIl+a+eg + vHi+D+++++++Q p+L++aLa+R e+pp l++T+ g+ e +    + ++ee+g++L +fA++ +++
  Kaladp0060s0202.1.p 147 PWHRFGFTAANTAILDAIEGYSSVHIVDLSLTHCMQIPTLIDALATRLESPPLLKLTVAGATEDVppmLELSYEELGSKLMNFARSRNIT 236
                          *************************************************************887798889999***************** PP

                 GRAS 176 fefnvl.......vakrledleleeLrvkp.gEalaVnlvlqlhrll.................desvsleserdevLklvkslsPkvvv 240
                          +ef+vl        a+ +++++ ++L  ++ gEal++n++++lh+++                 + s ++ s+r+ +Lk +++l P++v+
  Kaladp0060s0202.1.p 237 MEFRVLpssssdgFASLIDQIREQNLVHSQiGEALIINCHMMLHYIPeetlsmghtsdspspnlSTSPQTFSYRNFFLKKIRTLDPTLVI 326
                          ******8876666666667777777766669******************************99977777778899*************** PP

                 GRAS 241 vveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvpls 330
                          +v+++ad +s ++++r+ +a++y +  +d++++ l++ s++r+++E+  + ++i+nv+a ega+r+er e +++W +r++++GF+ ++++
  Kaladp0060s0202.1.p 327 LVDEDADFTSRNLVTRLRSAFNYLWIPYDTVDTFLAKGSKQRQWYEAD-ICWKIENVIAEEGARRVERPEPKGRWVQRMRSSGFRDISFG 415
                          ************************************************.***************************************** PP

                 GRAS 331 ekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                          e+aa+++k++l +++  g+ +++e+++lvl+Wk++++v++SaW
  Kaladp0060s0202.1.p 416 EEAASEVKTMLDEHA-AGWGLKKEDDELVLTWKGHNVVFASAW 457
                          ***************.99************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    
MMQFTESPTL HHHHQMMPLS NNPSMLNKLS NSVRPWPVGF PSSTKPIAGG GLGDANCMEQ  60
LLVHCATALE TNDATLAQQI LWVLNNIAAA DGDSNQRLTC GFLRALVSRA ARTGSCKILT  120
AAINTTASLA VHKFSVIELA SFVDLTPWHR FGFTAANTAI LDAIEGYSSV HIVDLSLTHC  180
MQIPTLIDAL ATRLESPPLL KLTVAGATED VPPMLELSYE ELGSKLMNFA RSRNITMEFR  240
VLPSSSSDGF ASLIDQIREQ NLVHSQIGEA LIINCHMMLH YIPEETLSMG HTSDSPSPNL  300
STSPQTFSYR NFFLKKIRTL DPTLVILVDE DADFTSRNLV TRLRSAFNYL WIPYDTVDTF  360
LAKGSKQRQW YEADICWKIE NVIAEEGARR VERPEPKGRW VQRMRSSGFR DISFGEEAAS  420
EVKTMLDEHA AGWGLKKEDD ELVLTWKGHN VVFASAWVPS I*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.10.0GRAS family protein