PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0060s0368.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 72aa    MW: 8009.95 Da    PI: 10.3817
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0060s0368.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.13.6e-122265146
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                         + +++++E +l  +  k+ G++ W++Ia +++ gRt++++k +w +
  Kaladp0060s0368.2.p 22 KPPFSEDEKDLVMRMYKLVGKR-WSLIAGRIP-GRTAEEIKAYWKN 65
                         579*******************.*********.***********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 72 aa     Download sequence    
MAQSGHSSTN SRDVSGSTAE SKPPFSEDEK DLVMRMYKLV GKRWSLIAGR IPGRTAEEIK  60
AYWKNNHSNR N*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46410.14e-19MYB_related family protein