PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0060s0392.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

WRKY

Protein Properties

Length: 582aa MW: 62202.4 Da PI: 6.9803

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0060s0392.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96	2.7e-30	346	404	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+++r+aed +++++tYeg+Hnh+ Kaladp0060s0392.1.p 346 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQIQRCAEDRTILVTTYEGNHNHP 404 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 582 aa Download sequence
MESTMRSEWK VASVVVDPDR YYSSSFFSNK PTVLNSLPIL TNYRAGGGDM FPIRRCGDLV 60 LEKPPVADRD CGGGDDDPDE SVKRVDVVDF FAERRFDDRS QSRDGCGLPV KRESSHGEAA 120 AAPLRELDVN TGLNLVMANR GSDESDDGSS ASDSKRAKIE LSQLQTELGR MTAENVKLKE 180 MLSHVSNNYE ALQLHMMSLM KQQQSSLQPE NGPEPKNGDH EKPAEKKHGV NAGLTEPRRF 240 LAIGRSGSGA ETDEVLSHSS SEDGTQSGSP QAAGKRPRGD SKKDNKMVAV REDSPNSDTQ 300 VWTADKPGNN TNPNTAKASI DQQSAEATMR KARVSVRARS EAPMISDGCQ WRKYGQKMAK 360 GNPCPRAYYR CTMAVGCPVR KQIQRCAEDR TILVTTYEGN HNHPLPPAAM SMASTTTAAA 420 AMLLSGSMSS ADGLMNPNFL ARAMLPACSS SMATISASAP FPTVTLDLTH TASPGPLQLQ 480 RPHLQAQFPG PIGSQILTSL PFITNALPQI FTQALHNQSK FSGLQVSQDD SINAVTAAIA 540 ADPSFTAAVA ATISSIISGG GANHSSNNNH NGSSITSIPP Q*

Sequence ? help Back to Top

Protein Sequence Length: 582 aa Download sequence

MESTMRSEWK VASVVVDPDR YYSSSFFSNK PTVLNSLPIL TNYRAGGGDM FPIRRCGDLV  60
LEKPPVADRD CGGGDDDPDE SVKRVDVVDF FAERRFDDRS QSRDGCGLPV KRESSHGEAA  120
AAPLRELDVN TGLNLVMANR GSDESDDGSS ASDSKRAKIE LSQLQTELGR MTAENVKLKE  180
MLSHVSNNYE ALQLHMMSLM KQQQSSLQPE NGPEPKNGDH EKPAEKKHGV NAGLTEPRRF  240
LAIGRSGSGA ETDEVLSHSS SEDGTQSGSP QAAGKRPRGD SKKDNKMVAV REDSPNSDTQ  300
VWTADKPGNN TNPNTAKASI DQQSAEATMR KARVSVRARS EAPMISDGCQ WRKYGQKMAK  360
GNPCPRAYYR CTMAVGCPVR KQIQRCAEDR TILVTTYEGN HNHPLPPAAM SMASTTTAAA  420
AMLLSGSMSS ADGLMNPNFL ARAMLPACSS SMATISASAP FPTVTLDLTH TASPGPLQLQ  480
RPHLQAQFPG PIGSQILTSL PFITNALPQI FTQALHNQSK FSGLQVSQDD SINAVTAAIA  540
ADPSFTAAVA ATISSIISGG GANHSSNNNH NGSSITSIPP Q*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-102	WRKY family protein