PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0060s0422.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRAS
Protein Properties Length: 501aa    MW: 55663.9 Da    PI: 5.587
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0060s0422.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS398.95.1e-1221295002374
                 GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91 
                          +elL+ cA+avs  d   a  l+  l +++s  g+p+qR+ ay++e+L+arl +s+ ++y++l+++e +   s e l+++ l+++++P+ 
  Kaladp0060s0422.1.p 129 KELLIWCAQAVSGADSFTAAILIDMLDQRVSVCGEPIQRVGAYMLEGLKARLEESGIKIYRSLHCNEPT---SPELLTSMGLLYQICPYW 215
                          789*****************************************************************9...99**************** PP

                 GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefn 179
                          kf++l aN  I ea+e+e+r+Hi+Df+i qG QW+ L+qaLa+Rp+gpp++RiTgv++++s+  +   le +ge+L+k+A++l+vpfef+
  Kaladp0060s0422.1.p 216 KFAYLSANVVIGEAAENESRIHILDFQIAQGSQWALLIQALAQRPGGPPHIRITGVDDHQSTkaRGGGLEMVGEKLSKLAASLNVPFEFH 305
                          **********************************************************9988889999********************** PP

                 GRAS 180 vlvakrle.dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalf 268
                             +++++ +++l++L + p Eal+Vn+ + lh++ desvs+ ++rd++L+l+k+ sPkvv+++eqe+++n++ F+ rf+e+l+yy+a+f
  Kaladp0060s0422.1.p 306 DAEMTDFNfSVQLQNLLIYPSEALIVNFPYVLHHMADESVSTVNHRDQLLRLIKGYSPKVVTLIEQESNTNTAAFVPRFIETLDYYTAMF 395
                          986666653689****************************************************************************** PP

                 GRAS 269 dsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgsl 358
                          +s+++klp+++++ri  E+ +++r+ivn++acegaer+erhe l+kWr+rl++aGF+++pls ++a+ +k +l+ ++++ y++ e++g+l
  Kaladp0060s0422.1.p 396 ESIDVKLPKDDDNRIRAEQNCVARDIVNMIACEGAERVERHEVLGKWRARLSMAGFTQYPLSPTVAEVIKNMLNDYSGN-YKLAEDKGAL 484
                          *****************************************************************************77.********** PP

                 GRAS 359 vlgWkdrpLvsvSaWr 374
                          +l Wk+r++ + SaWr
  Kaladp0060s0422.1.p 485 ILSWKNRAMSTSSAWR 500
                          ***************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 501 aa     Download sequence    
MQTSQKHHHS SGFDNFYQTT DSRTGSDNGS TGSHSSYPAS NVQIFTLESY DVTDSYMAYD  60
SPVAASVSSY MSPVSFSSQG SQSILSEHYR SPENTCESLF TGYPAIAENP SAVLIRNQII  120
ERSKKLGMKE LLIWCAQAVS GADSFTAAIL IDMLDQRVSV CGEPIQRVGA YMLEGLKARL  180
EESGIKIYRS LHCNEPTSPE LLTSMGLLYQ ICPYWKFAYL SANVVIGEAA ENESRIHILD  240
FQIAQGSQWA LLIQALAQRP GGPPHIRITG VDDHQSTKAR GGGLEMVGEK LSKLAASLNV  300
PFEFHDAEMT DFNFSVQLQN LLIYPSEALI VNFPYVLHHM ADESVSTVNH RDQLLRLIKG  360
YSPKVVTLIE QESNTNTAAF VPRFIETLDY YTAMFESIDV KLPKDDDNRI RAEQNCVARD  420
IVNMIACEGA ERVERHEVLG KWRARLSMAG FTQYPLSPTV AEVIKNMLND YSGNYKLAED  480
KGALILSWKN RAMSTSSAWR *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17230.11e-176GRAS family protein