PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0060s0471.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 378aa MW: 42488.9 Da PI: 7.0173

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0060s0471.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.7	2.6e-18	66	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd l +++++G g+W++ ar+ g++Rt+k+c++rw++yl Kaladp0060s0471.1.p 66 RGPWTVEEDHTLMSYIAKHGEGRWNSLARCAGLKRTGKSCRLRWLNYL 113 89********************************************97 PP
2	Myb_DNA-binding	51	3.4e-16	119	162	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++ Kaladp0060s0471.1.p 119 RGNITLEEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 162 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MEGYMNGRSV AAEKQQQYYS NMSSLVGGGG VAMSSNSNNQ NHHKVQSSSS GEEEEDEMGM 60 MMDLRRGPWT VEEDHTLMSY IAKHGEGRWN SLARCAGLKR TGKSCRLRWL NYLRPDVRRG 120 NITLEEQLLI LELHSRWGNR WSKIAQHLPG RTDNEIKNYW RTRVQKHAKQ LKCDVNSKQF 180 KDTMRYLWMP RLVERIQAAA AANGASSPRN PLNHTLPNLT APIHHHHHHN LIIPPTTAPS 240 HHFTSSSYVC SDNSSTTAAS SDSFGAQVSP ASDMAEDYQM PGSCYNLNNN VDYFTGSNNG 300 GQICYSDSLI SPAGYYHPQA ADFPSMEQHS SNNQNSSGLI SNNLNQWLVE GGDLSDNMWN 360 VEDIWLLQQQ QLNNNNY*

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MEGYMNGRSV AAEKQQQYYS NMSSLVGGGG VAMSSNSNNQ NHHKVQSSSS GEEEEDEMGM  60
MMDLRRGPWT VEEDHTLMSY IAKHGEGRWN SLARCAGLKR TGKSCRLRWL NYLRPDVRRG  120
NITLEEQLLI LELHSRWGNR WSKIAQHLPG RTDNEIKNYW RTRVQKHAKQ LKCDVNSKQF  180
KDTMRYLWMP RLVERIQAAA AANGASSPRN PLNHTLPNLT APIHHHHHHN LIIPPTTAPS  240
HHFTSSSYVC SDNSSTTAAS SDSFGAQVSP ASDMAEDYQM PGSCYNLNNN VDYFTGSNNG  300
GQICYSDSLI SPAGYYHPQA ADFPSMEQHS SNNQNSSGLI SNNLNQWLVE GGDLSDNMWN  360
VEDIWLLQQQ QLNNNNY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49620.1	2e-81	MYB family protein