PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0061s0050.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

NAC

Protein Properties

Length: 549aa MW: 61412.4 Da PI: 4.53

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0061s0050.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.2	1.1e-51	9	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 l+pGfrFhPtdeelv +yL++k+ gk +++ ++i+ +d+yk+ePw+Lp k k+k+++ ewyfFs d+ky +g+++nrat++gyWk+tgk Kaladp0061s0050.2.p 9 LAPGFRFHPTDEELVRYYLRRKICGKGFRF-DAIAATDVYKSEPWELPgKsKLKSRDLEWYFFSMLDRKYGNGSKTNRATENGYWKTTGK 97 579************************9.99***********6347777888**************************** PP NAM 89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 d++vl+ k ++vg+kktLv+++grap+g +++Wvmheyrl Kaladp0061s0050.2.p 98 DRPVLH-KAKTVGMKKTLVYHRGRAPHGARSNWVMHEYRL 136 **.9999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 549 aa Download sequence
MGRKPATSLA PGFRFHPTDE ELVRYYLRRK ICGKGFRFDA IAATDVYKSE PWELPGKSKL 60 KSRDLEWYFF SMLDRKYGNG SKTNRATENG YWKTTGKDRP VLHKAKTVGM KKTLVYHRGR 120 APHGARSNWV MHEYRLIDED LEKAGVLQDA FVLCRIFQKS GSGPKNGEQY GAPFEEEEWD 180 DDEVATVPGE QLTNEVVVFD NPYPEVGDVN TDADELVQNN YDISPSAPPP FDYCDDSGSY 240 LFDDQKPFIG TRENYESNLV DGESCFDVLN FPEPCEGEVK QVKVEHLVDS GENPLDASYL 300 LDEHYLNANQ EPVLNEGLFL ETDDLINQME PGPSDFDMLD EYLKYFDSAD SNSTYVLPEN 360 GALPQTESQV VATKSLLTPE VDKEIEYLAL KSQQLPDAQG SDVASSSSQC PEDTKFNSDY 420 KHQFVNMLGK KPSPYSFSTK DASLRLASSS HSSSSIHVTA GMVQIRNTDA FGNRLSWTFN 480 KNGNIEVVLS LALPQTDGNS TSVDMLANML SGKASSAMAR VWFYLIVFWV FIISISFKIA 540 SLVSTKQG*

Sequence ? help Back to Top

Protein Sequence Length: 549 aa Download sequence

MGRKPATSLA PGFRFHPTDE ELVRYYLRRK ICGKGFRFDA IAATDVYKSE PWELPGKSKL  60
KSRDLEWYFF SMLDRKYGNG SKTNRATENG YWKTTGKDRP VLHKAKTVGM KKTLVYHRGR  120
APHGARSNWV MHEYRLIDED LEKAGVLQDA FVLCRIFQKS GSGPKNGEQY GAPFEEEEWD  180
DDEVATVPGE QLTNEVVVFD NPYPEVGDVN TDADELVQNN YDISPSAPPP FDYCDDSGSY  240
LFDDQKPFIG TRENYESNLV DGESCFDVLN FPEPCEGEVK QVKVEHLVDS GENPLDASYL  300
LDEHYLNANQ EPVLNEGLFL ETDDLINQME PGPSDFDMLD EYLKYFDSAD SNSTYVLPEN  360
GALPQTESQV VATKSLLTPE VDKEIEYLAL KSQQLPDAQG SDVASSSSQC PEDTKFNSDY  420
KHQFVNMLGK KPSPYSFSTK DASLRLASSS HSSSSIHVTA GMVQIRNTDA FGNRLSWTFN  480
KNGNIEVVLS LALPQTDGNS TSVDMLANML SGKASSAMAR VWFYLIVFWV FIISISFKIA  540
SLVSTKQG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	1e-134	NAC family protein