PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0061s0059.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

ARF

Protein Properties

Length: 606aa MW: 66208.5 Da PI: 8.0565

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0061s0059.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	72.7	4.7e-23	112	211	3	99
EE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 3 kvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 k+lt+sd+++ g +++p+ +a+++ ++ + tl ++d +g++W++++i+r++++r++lt+GW++Fv+ ++L +gD+vvF+ Kaladp0061s0059.1.p 112 KTLTQSDANNGGGFSVPRFCADSFfprldytADPPVQ--TLHIKDVHGKVWKFRHIFRGTPRRHLLTTGWSSFVNHKQLVAGDSVVFM-- 197 89**************999999997556555..8**********************************************.. PP SSSEE..EEEEE-S CS B3 86 grsefelvvkvfrk 99 + ++el+++ +r+ Kaladp0061s0059.1.p 198 KAADGELFIGTRRA 211 55899999999986 PP
2	Auxin_resp	96.8	3.1e-32	271	353	2	83
Auxin_resp 2 ahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 a a+ +++Fev Y+Pra+++eF+vk++ v++al++++ Gm+fkm feted+s+ ++ Gt+v+ +++dp+rWp+S+Wr+L+ Kaladp0061s0059.1.p 271 ALLAAGGKAFEVNYYPRATSAEFCVKASAVSAALRTQWRFGMKFKMPFETEDASRVSWfVGTIVAAQAADPLRWPKSPWRLLQ 353 56678899*************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 606 aa Download sequence
MESCLDGGLW QVCAGNMVQV PQVDSNVVYF PQGHAEHANG IVNFKDFPEI PDMVVCKVSG 60 VKHMADVETD ELFLRLRLVP LRISVTNLEL EEDNSVGHVG QDALVKSASV SKTLTQSDAN 120 NGGGFSVPRF CADSFFPRLD YTADPPVQTL HIKDVHGKVW KFRHIFRGTP RRHLLTTGWS 180 SFVNHKQLVA GDSVVFMKAA DGELFIGTRR AKRGTGGGKA QCGWTPAGGI CDWPDGGGCR 240 MFENGTTGTQ MSYGCSSVGG KVSVESVLEA ALLAAGGKAF EVNYYPRATS AEFCVKASAV 300 SAALRTQWRF GMKFKMPFET EDASRVSWFV GTIVAAQAAD PLRWPKSPWR LLQVTWDEPD 360 LLHSAKRVNP WMADLVVSGM PNMHLVPFSL PMKRLRPAQS PDLPLSSLRP APLHPRNPFV 420 SHLSYHPVAD NEPADIQGAR HVQCTQYPMN FHLNNVVQPF LFPQFRPPQA APPPPPGGVN 480 LTRPQRNEDM SCLLTLGNHP ETPMKNETKT TSTSIVLFGK HIHAEEKKSQ GSSDATAILS 540 DVIMEKVQVA SEGSRSGSVQ NGQKQCSSES RSPCCHSLLS TQMAPQAFSS LALEQTRCHL 600 CRLTI*

Sequence ? help Back to Top

Protein Sequence Length: 606 aa Download sequence

MESCLDGGLW QVCAGNMVQV PQVDSNVVYF PQGHAEHANG IVNFKDFPEI PDMVVCKVSG  60
VKHMADVETD ELFLRLRLVP LRISVTNLEL EEDNSVGHVG QDALVKSASV SKTLTQSDAN  120
NGGGFSVPRF CADSFFPRLD YTADPPVQTL HIKDVHGKVW KFRHIFRGTP RRHLLTTGWS  180
SFVNHKQLVA GDSVVFMKAA DGELFIGTRR AKRGTGGGKA QCGWTPAGGI CDWPDGGGCR  240
MFENGTTGTQ MSYGCSSVGG KVSVESVLEA ALLAAGGKAF EVNYYPRATS AEFCVKASAV  300
SAALRTQWRF GMKFKMPFET EDASRVSWFV GTIVAAQAAD PLRWPKSPWR LLQVTWDEPD  360
LLHSAKRVNP WMADLVVSGM PNMHLVPFSL PMKRLRPAQS PDLPLSSLRP APLHPRNPFV  420
SHLSYHPVAD NEPADIQGAR HVQCTQYPMN FHLNNVVQPF LFPQFRPPQA APPPPPGGVN  480
LTRPQRNEDM SCLLTLGNHP ETPMKNETKT TSTSIVLFGK HIHAEEKKSQ GSSDATAILS  540
DVIMEKVQVA SEGSRSGSVQ NGQKQCSSES RSPCCHSLLS TQMAPQAFSS LALEQTRCHL  600
CRLTI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	1e-156	ARF family protein