PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0061s0066.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C3H
Protein Properties Length: 238aa    MW: 26136 Da    PI: 8.4779
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0061s0066.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH36.11.1e-11626425
                         ---SGGGGTS--TTTTT-SS-S CS
              zf-CCCH  4 elCrffartGtCkyGdrCkFaH 25
                          lCr+++r G C+yG+rCkFaH
  Kaladp0061s0066.1.p  6 QLCRYYQR-GSCQYGARCKFAH 26
                         69******.************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MQPSKQLCRY YQRGSCQYGA RCKFAHEIEQ PSKPNNSFGF GVQQNPGSVQ QQNNPFGFGV  60
QSGLNSQSQH SRSAQQQPNP FGFGVKGNNP SSKPFDNKWS RVSANPGTGA AASSRKGDGQ  120
SPAATHSCTD PDSCKKQIAE DFEHERPLWK LTCYSHHKYA PCDITGDVSY EELRMSAYDD  180
AKSGMSLPAI VEKERGLLNA KLVEFEALLR NPYKGPHIHP IDLSQGHKTH NVVLEAN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75340.11e-64C3H family protein