PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0061s0066.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C3H
Protein Properties Length: 203aa    MW: 22204.4 Da    PI: 8.4728
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0061s0066.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH36.48.7e-12626425
                         ---SGGGGTS--TTTTT-SS-S CS
              zf-CCCH  4 elCrffartGtCkyGdrCkFaH 25
                          lCr+++r G C+yG+rCkFaH
  Kaladp0061s0066.2.p  6 QLCRYYQR-GSCQYGARCKFAH 26
                         69******.************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MQPSKQLCRY YQRGSCQYGA RCKFAHEIEQ PSKPNNSFGF GVQQNPGSVQ QQNNPFGFGV  60
QSGLNSQSQH SRSAQQQPNP FGFGVKGNNP SSKPFDNKWS RVSANPGTGA AASSRKGDGQ  120
SPAATHSCTD PDSCKKQIAE DFEHERPLWK LTCYSHHKYA PCDITGDVSY EELRMSAYDD  180
AKSGMSLPAI VSVDTTSFKY FT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75340.13e-51C3H family protein