PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0061s0112.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 241aa    MW: 26537.1 Da    PI: 10.3873
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0061s0112.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.81.9e-055577123
                         EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                         y+C+ C+++F++   L  H+++H
  Kaladp0061s0112.1.p 55 YTCSFCTRRFKSAQALGGHMNVH 77
                         9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MEKVVMRSRC EAVVLSNRDM NRKLKDKLRY KDEGTSNGVV TRDADLLTSW PPRYYTCSFC  60
TRRFKSAQAL GGHMNVHRRA RAILRSQSMS TLPSPPSSPW LIKTVITPAD HPLQDDNHNH  120
LFILPNPNPH WPSNTPHHAS VISPSPSYLP IISTTSTARS STSKHKHPLL AAAANKHAPQ  180
GLYSTGERDK KNSVKAEMNG GLRSRTDQDD VVVRLSLCTG LITSSSAADQ GIDLELRLGV  240
*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.15e-18C2H2 family protein