PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0061s0149.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 261aa    MW: 30180.1 Da    PI: 8.099
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0061s0149.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF93.68.8e-30959151
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         krienk+nrqvtfskRr+g+ KKA+E+SvLCdaeva+iifs +gk++eys+
  Kaladp0061s0149.1.p  9 KRIENKINRQVTFSKRRTGLVKKAHEISVLCDAEVALIIFSGKGKMFEYST 59
                         79***********************************************96 PP
2K-box98.68.9e-33841795100
                K-box   5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaL 94 
                           g s ++ ++e+ + e+ kLk+++e Lqr++Rh lGed++sLs++eLq+Le+qL+++lk++R++Kn+l++e+i+elqkke+++qe+n+ L
  Kaladp0061s0149.1.p  84 MGASDHSPQEENITMEYHKLKSKLELLQRSHRHCLGEDVDSLSMRELQNLEHQLDTALKRVRARKNQLMHESISELQKKERAMQEQNNLL 173
                          4455788899******************************************************************************** PP

                K-box  95 rkklee 100
                          +k+++e
  Kaladp0061s0149.1.p 174 TKRVKE 179
                          *99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MGRGRVELKR IENKINRQVT FSKRRTGLVK KAHEISVLCD AEVALIIFSG KGKMFEYSTD  60
SCMEKILERY ERHSYAERQH YQQMGASDHS PQEENITMEY HKLKSKLELL QRSHRHCLGE  120
DVDSLSMREL QNLEHQLDTA LKRVRARKNQ LMHESISELQ KKERAMQEQN NLLTKRVKEK  180
EKTLMGQQEE AHPHPWAVHH EHHHNHGATS LSSFHSSQPV PSLNAAFAHR GEADDGRMSP  240
NELDLTLEPI YSYHLGCYAA *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69120.11e-100MIKC_MADS family protein