PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0062s0046.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

NAC

Protein Properties

Length: 435aa MW: 48981.6 Da PI: 4.62

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0062s0046.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	107	2.2e-33	58	197	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra... 77 lp+G++F+P+d+e+++ +L kv++++ ++ e+i++vd i++++P++Lp vk++ + ++fF+++ k+y++g+rk+r+ Kaladp0062s0046.2.p 58 LPRGVKFDPSDQEIIW-HLLTKVDSTNltphpfID--EFIATVDkddgICYTHPQNLP-GVKQDGSVTHFFHRAIKAYNSGTRKRRKihg 143 799**********5.566677777656754433..33555544456******.677888999**************8455 PP NAM 78 ..tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +++ +W++tg++k+v+ +g + g+kk++v+y ++ k+ekt+Wvmh+y+l Kaladp0062s0046.2.p 144 ddASDVRWHKTGRTKPVML-DGVQRGCKKIMVLYmtAAKGGKAEKTNWVMHQYHL 197 5545899********.99********4434666778*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MARPAWLVDS TRIATKIKSA STACPPESIN WKSNPSRICP NCQHCIDNSD VPQEWPGLPR 60 GVKFDPSDQE IIWHLLTKVD STNLTPHPFI DEFIATVDKD DGICYTHPQN LPGVKQDGSV 120 THFFHRAIKA YNSGTRKRRK IHGDDASDVR WHKTGRTKPV MLDGVQRGCK KIMVLYMTAA 180 KGGKAEKTNW VMHQYHLGTE EDEKDGEYVI SKVFYQQNQA KLGENFEAEL MEISDLAAQK 240 VDPLTPKSVS PEPRRDERPY AELGNIDEAT DVNVESFAQD QLEADYVTNA DLEETMDLRN 300 QQLLNEENAL DDLMDYNDIN AGEGQKWWDS ESQNLLDSQQ LVEGLSLCDD LLRSQSPSRD 360 FAVPEPHKPK AKPCLSDYAT LGPNDLKRDL EECQKLVLDP ANIEIDTPPD YRLSQLEFGS 420 QDSFLAWGGH KLGD*

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MARPAWLVDS TRIATKIKSA STACPPESIN WKSNPSRICP NCQHCIDNSD VPQEWPGLPR  60
GVKFDPSDQE IIWHLLTKVD STNLTPHPFI DEFIATVDKD DGICYTHPQN LPGVKQDGSV  120
THFFHRAIKA YNSGTRKRRK IHGDDASDVR WHKTGRTKPV MLDGVQRGCK KIMVLYMTAA  180
KGGKAEKTNW VMHQYHLGTE EDEKDGEYVI SKVFYQQNQA KLGENFEAEL MEISDLAAQK  240
VDPLTPKSVS PEPRRDERPY AELGNIDEAT DVNVESFAQD QLEADYVTNA DLEETMDLRN  300
QQLLNEENAL DDLMDYNDIN AGEGQKWWDS ESQNLLDSQQ LVEGLSLCDD LLRSQSPSRD  360
FAVPEPHKPK AKPCLSDYAT LGPNDLKRDL EECQKLVLDP ANIEIDTPPD YRLSQLEFGS  420
QDSFLAWGGH KLGD*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	1e-176	NAC family protein