PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0062s0059.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 204aa    MW: 23577.6 Da    PI: 9.7437
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0062s0059.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.38.8e-1994141148
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                          rg+WT eEd +l  +++ +G g+W++ ar+ g++Rt+k+c++rw++yl
  Kaladp0062s0059.1.p  94 RGPWTDEEDRILSSYIANHGEGRWNSLARCAGLNRTGKSCRLRWLNYL 141
                          89********************************************97 PP
2Myb_DNA-binding50.45.2e-16147190146
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                          rg+ + eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++
  Kaladp0062s0059.1.p 147 RGNISLEEQLLILELHSRWGNR-WSKIAKYLP-GRTDNEIKNYWRT 190
                          78999*****************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MSHTNQSNTH PSFLLLHLED CLFQLTHIAK SPPNANWPHR VSSSQMNNNH GILMMNGGGG  60
VFSGHSVNSL PSSYKQRQEE PEDDMTTMME DLRRGPWTDE EDRILSSYIA NHGEGRWNSL  120
ARCAGLNRTG KSCRLRWLNY LRPDVRRGNI SLEEQLLILE LHSRWGNRWS KIAKYLPGRT  180
DNEIKNYWRT RVQKHAKQLK CDR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49620.11e-61MYB family protein