PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0062s0060.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 82aa    MW: 9622.96 Da    PI: 9.9494
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0062s0060.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding643e-20754148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         rg+WT eEd +l  +++++G g+W++ ar+ g++Rt+k+c++rw++yl
  Kaladp0062s0060.1.p  7 RGPWTDEEDRILSSYIAKHGEGRWNSLARCAGLNRTGKSCRLRWLNYL 54
                         89*********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 82 aa     Download sequence    
MMEDLRRGPW TDEEDRILSS YIAKHGEGRW NSLARCAGLN RTGKSCRLRW LNYLRPDVRR  60
GNISLEEQLL ILELHSRWGN R*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06490.16e-36MYB family protein