PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0062s0146.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 327aa    MW: 35870.1 Da    PI: 9.8408
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0062s0146.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding361.6e-111565146
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                         +++WT+eE+  l+ +v ++G g W+tI +          R+  ++k++w++
  Kaladp0062s0146.1.p 15 KQKWTAEEESALKAGVVKHGAGKWRTILKDPEfssvlYLRSNVDLKDKWRN 65
                         79***********************************88***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MMTPINDFVL MGAPKQKWTA EEESALKAGV VKHGAGKWRT ILKDPEFSSV LYLRSNVDLK  60
DKWRNMSVMA NGWGSREKAR LALKRMQGQS TPKPDENQML LTYGPHSEDE SVDLKPLPSP  120
GVAHQASGSK RTITRLDNLI MEAINELKEP GGSNKTSIGN YIEEQYWAPP NFKRLLSAKL  180
KFFVSSGKLV KVKRKYRMPT SQVSPEKKKS PHPSLNLLEG RSRLPSRIDY DNFNLNDIKT  240
TSRAEIDLEL AKMRNMTAEE AAVAAARAVA EAEAAIAEAE EAAREAEAAE ADAEAAMAFA  300
EAARKTLKGR SGIKTVCSTV PIAACP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.12e-91MYB_related family protein