PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0062s0156.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family LBD
Protein Properties Length: 193aa    MW: 21147.9 Da    PI: 5.3055
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0062s0156.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260911.4e-282104198
               DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqq 85 
                          +C++C+vlr++C++dC+l++ +     p++q  ++ +v+++FG++ + ++++a+p ++r+ +++sl++eA  r+ +Pv+G++g+++++++
  Kaladp0062s0156.1.p   2 SCNGCRVLRKGCKEDCILRQSLewiqnPQAQGYATLFVARFFGRAGLFSFISAVPAHQRPGLFQSLLFEAAGRTVNPVSGSAGLLWTGNW 91 
                          6*************************99************************************************************** PP

               DUF260  86 qleqlkaelallk 98 
                          q +q+++e++l++
  Kaladp0062s0156.1.p  92 QACQAAVEAVLRG 104
                          *******998765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MSCNGCRVLR KGCKEDCILR QSLEWIQNPQ AQGYATLFVA RFFGRAGLFS FISAVPAHQR  60
PGLFQSLLFE AAGRTVNPVS GSAGLLWTGN WQACQAAVEA VLRGGSLSPE MLAVVPEIDF  120
FKEPGTVEVK TSATPDATQI ETGTMTFHEE RQHEARVDDL VEESETTTFE SSSTYNGCYR  180
SRKDLKLLSL FV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49940.14e-60LBD family protein