PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0063s0022.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 278aa    MW: 30537 Da    PI: 7.3011
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0063s0022.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.61.6e-09756346
                         SS-HHHHHHHHHHHHHTTTT.......-HHHHHHHHTTTS-HHHHHHHHHH CS
      Myb_DNA-binding  3 rWTteEdellvdavkqlGgg.......tWktIartmgkgRtlkqcksrwqk 46
                         +W+ +Ed  + da++ +  +       +W++Ia+ ++ +++  q+k++++ 
  Kaladp0063s0022.1.p  7 SWSRDEDRAFEDAIATHWVEnledsdeHWEKIAAALP-TKSIHQLKHHYRL 56
                         7*****************99*****************.***********96 PP
2Myb_DNA-binding40.75.6e-13126170347
                          SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          +WT+eE+ l++ +  ++G+g+W++I+r +  +Rt+ q+ s+ qky
  Kaladp0063s0022.1.p 126 PWTEEEHRLFLLGLDKFGKGDWRSISRNFVITRTPTQVASHAQKY 170
                          7*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MTSSSSSWSR DEDRAFEDAI ATHWVENLED SDEHWEKIAA ALPTKSIHQL KHHYRLLVED  60
VNDIDAGIIP LPEYVGDDAS PSSSSKKSPY IADSNNNNNN SKKGFPGHES KANSNRSEQE  120
RRKGIPWTEE EHRLFLLGLD KFGKGDWRSI SRNFVITRTP TQVASHAQKY FIRLSSMNRD  180
RRRSSIHDIT SVNNGDITTP ITGQPASTNP NGGVPAGPTK HRPPEMGMYG APVGQVVGAP  240
VGHVAAVGTP VMMPPGHHPP YVVPVPYPVA PQPMHQH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.17e-63MYB family protein