PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0064s0028.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 242aa    MW: 27085.5 Da    PI: 9.8078
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0064s0028.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.11.7e-1985139256
                          T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          rk+ +++keq + Lee F++n++++ +++eeLA++l+L  rqV vWFqNrRa+ k
  Kaladp0064s0028.1.p  85 RKKLRLSKEQSRLLEESFRQNHTLNPKQKEELADRLKLRPRQVEVWFQNRRARSK 139
                          788899***********************************************98 PP
2HD-ZIP_I/II117.11e-3785173189
          HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 
                          +kk+rlskeq++lLEesF+++++L+p++K+ela +L+l+prqv+vWFqnrRAR k+kq+E ++e+Lkr++ +l+e+n++L+keveeLr+
  Kaladp0064s0028.1.p  85 RKKLRLSKEQSRLLEESFRQNHTLNPKQKEELADRLKLRPRQVEVWFQNRRARSKLKQTEIECEYLKRWFGSLTEQNQKLQKEVEELRA 173
                          69*************************************************************************************94 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MGGVTPTTST CLDLTISVPG SSSARDVNMK PLRLLSKRSE PDDNWINLGY PKTSEDAEDN  60
DTDSPNEDQG RGGGGGRWDR NPPPRKKLRL SKEQSRLLEE SFRQNHTLNP KQKEELADRL  120
KLRPRQVEVW FQNRRARSKL KQTEIECEYL KRWFGSLTEQ NQKLQKEVEE LRAMKVGPPS  180
VLSARSCEPT LASSLTMCPR CERVSSNTAR VEKPATGPTS TAAMSDKVAA LQQFRQPSAA  240
F*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1134142RRARSKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01430.12e-70HD-ZIP family protein