PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0064s0043.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRAS
Protein Properties Length: 586aa    MW: 64597.2 Da    PI: 4.8634
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0064s0043.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS459.61.9e-1402215801374
                 GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPi 90 
                          lv++L++cA+a+++++l+ a++l++++  la++++ +m+++a+yf+eALa+r+++    +y    p+e+   n s +   l  f+e++P+
  Kaladp0064s0043.1.p 221 LVHTLMACADAIQQSNLKVAETLINQIGMLAASQAGAMRKVATYFAEALARRIFN----CY----PQESI--NPSFTDLLLMHFYETCPY 300
                          689***************************************************9....44....33333..22333333446******* PP

                 GRAS  91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnv 180
                          lkf+h+taNqaIlea++++++vH+iDf+++qG+QWpaL+qaLa Rp+gpp +R+Tg+g+p++++k++l+e+g rLa++Ae+++v+fef+ 
  Kaladp0064s0043.1.p 301 LKFAHFTANQAILEAFSNKKKVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPSPDNKDRLREVGLRLAQLAETIHVDFEFRG 390
                          ****************************************************************************************** PP

                 GRAS 181 lvakrledleleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalf 268
                          +va++l+dl+ ++L++kp   E++aVn+v++lhrll++++++e+    vL ++k+++P++v+vveqea+hn++ Fl+rf+e+l+yys++f
  Kaladp0064s0043.1.p 391 FVANSLADLDASMLELKPseTESVAVNSVFELHRLLARPGAVEK----VLTVIKEIKPEIVTVVEQEANHNGPVFLDRFTESLHYYSTMF 476
                          ******************99999*********************....****************************************** PP

                 GRAS 269 dsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgs 357
                          dsle +   ++++++++++++lgr+i++vvaceg +r+erhetle+Wr+r+++aGF++v+++++a kqa++ll  ++ +dgyrvee++g+
  Kaladp0064s0043.1.p 477 DSLEGS---TNSQDKVMSEVYLGRQICDVVACEGLDRVERHETLEQWRARFGSAGFESVHIGSNAFKQARMLLDLFSgGDGYRVEENNGC 563
                          ***999...79999**************************************************************************** PP

                 GRAS 358 lvlgWkdrpLvsvSaWr 374
                          l+lgW++rpL+++SaWr
  Kaladp0064s0043.1.p 564 LMLGWHTRPLIATSAWR 580
                          ****************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 586 aa     Download sequence    
MKRENQYLYP HPDPSAAGSS SSTGGKTKVC WEDDSLPEAG MDELLAVLGY KVKSSDMAEV  60
AQKLEQLEEV MGSVREDGLS HLASETVHYN PSDISNWIEN MLSEFVPPSF DSNLQPLPPT  120
SIDSFIPQVG PVDFPVMLDQ PKLSPIFGGG DSSSSLPDYD LKAIPGNRII YPQNQQQQQL  180
EELSSSANKR LKPTAPPTEA PLTTSTRPVV LVDSQEAGVR LVHTLMACAD AIQQSNLKVA  240
ETLINQIGML AASQAGAMRK VATYFAEALA RRIFNCYPQE SINPSFTDLL LMHFYETCPY  300
LKFAHFTANQ AILEAFSNKK KVHVIDFSMN QGMQWPALMQ ALALRPGGPP AFRLTGIGPP  360
SPDNKDRLRE VGLRLAQLAE TIHVDFEFRG FVANSLADLD ASMLELKPSE TESVAVNSVF  420
ELHRLLARPG AVEKVLTVIK EIKPEIVTVV EQEANHNGPV FLDRFTESLH YYSTMFDSLE  480
GSTNSQDKVM SEVYLGRQIC DVVACEGLDR VERHETLEQW RARFGSAGFE SVHIGSNAFK  540
QARMLLDLFS GGDGYRVEEN NGCLMLGWHT RPLIATSAWR IGSSQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.10.0GRAS family protein