PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0064s0083.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRAS
Protein Properties Length: 453aa    MW: 51073.5 Da    PI: 6.451
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0064s0083.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4654.4e-142484491374
                 GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPi 90 
                          l++lLl+cA++v++g+le a+ +L ++s++aspdgd+mqR+a+yfteALa+r+++s+++ly+al++++ +  ++ ee+ a+klf ev+P+
  Kaladp0064s0083.1.p  48 LIHLLLTCATHVATGSLESANIALDQISQIASPDGDTMQRIASYFTEALASRILKSWPGLYRALNSTRMP--TVHEEILARKLFLEVFPF 135
                          689*************************************************************999998..6***************** PP

                 GRAS  91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnv 180
                          lk+ +l++NqaI ea+ege+++HiiD+   +++QW+aLlq L++Rpegpp+lRiTg+++    +ke l ++++rL+  Ae+l++pf+fn+
  Kaladp0064s0083.1.p 136 LKIMYLVTNQAIIEAMEGEKMIHIIDLCSAEPAQWVALLQMLSARPEGPPHLRITGIHQ----QKEVLDQMAQRLNVEAERLDIPFQFNP 221
                          ***********************************************************....9************************** PP

                 GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrll...................................desvsleserdevLklvksls 235
                           v+++le l++++Lrvk+gEala++++lqlh+ll                                   ++++s + + d++L  ++sls
  Kaladp0064s0083.1.p 222 -VVSALERLDFDSLRVKTGEALAISSILQLHKLLasdddrfnnpekprnqhqatfgeliekdtspdstsSSPLSFSTKMDSFLMDLRSLS 310
                          .799*************************************************************9999888999999************ PP

                 GRAS 236 PkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFk 325
                          Pkvvvv+eq+++hns++++er++eal+yy+alfd+le+ ++r+s er  vE++llg+ei+n++aceg+er+erhe+l+kW +rl++aGF+
  Kaladp0064s0083.1.p 311 PKVVVVAEQDSNHNSPTLMERLTEALYYYAALFDCLESRVSRTSPERLRVEKVLLGEEIKNIIACEGRERKERHEKLHKWAQRLNAAGFG 400
                          ****************************************************************************************** PP

                 GRAS 326 pvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                          + pls++a+ qa++ll+ ++ dgy++ +e+gs+vl+W+dr+L+ vSaWr
  Kaladp0064s0083.1.p 401 ASPLSYHAMLQARRLLQGYGCDGYQLRDENGSIVLCWQDRALFCVSAWR 449
                          ************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 453 aa     Download sequence    
MAPTFQEDGS SSVTSSPLHF FSMMSLSPGS SAYPWIRELK SEERGLYLIH LLLTCATHVA  60
TGSLESANIA LDQISQIASP DGDTMQRIAS YFTEALASRI LKSWPGLYRA LNSTRMPTVH  120
EEILARKLFL EVFPFLKIMY LVTNQAIIEA MEGEKMIHII DLCSAEPAQW VALLQMLSAR  180
PEGPPHLRIT GIHQQKEVLD QMAQRLNVEA ERLDIPFQFN PVVSALERLD FDSLRVKTGE  240
ALAISSILQL HKLLASDDDR FNNPEKPRNQ HQATFGELIE KDTSPDSTSS SPLSFSTKMD  300
SFLMDLRSLS PKVVVVAEQD SNHNSPTLME RLTEALYYYA ALFDCLESRV SRTSPERLRV  360
EKVLLGEEIK NIIACEGRER KERHEKLHKW AQRLNAAGFG ASPLSYHAML QARRLLQGYG  420
CDGYQLRDEN GSIVLCWQDR ALFCVSAWRC RR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein