PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0064s0170.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 221aa    MW: 24084.4 Da    PI: 11.0443
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0064s0170.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.74.9e-143380355
                         HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                         r+h e+E+rRRdriN  + +Lr+l+Pk+      K++Ka+ L ++++++k Lq
  Kaladp0064s0170.1.p 33 RSHTEAEKRRRDRINGHLLTLRKLVPKS-----DKMDKAALLARVIQHVKGLQ 80
                         78*************************8.....7*****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MLSRRDTVAR RTTRRWPASS KNGRAAAAAS SSRSHTEAEK RRRDRINGHL LTLRKLVPKS  60
DKMDKAALLA RVIQHVKGLQ GEAAEVGKAL TVPTDVDEVR ISTYAAAAES TSGSQTDIFM  120
EASLCCEDRP ELFAEIDQAL QSLNLSTARV EMGSLGGRVR IILLLSGNGI RNDSCSSQNR  180
MINLKGSLNV ALNRIVNSTP SVSSYRVTSK RQRFFLPSDT *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.15e-42bHLH family protein