PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0065s0005.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 230aa    MW: 26631.3 Da    PI: 9.7827
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0065s0005.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF93.78.8e-30959151
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         k+ien +nrqvtf+kRrng++KKA+ELSvLCdae+a+++fs++g+lyeys+
  Kaladp0065s0005.2.p  9 KKIENPTNRQVTFCKRRNGLMKKAYELSVLCDAEIALMVFSNRGRLYEYSN 59
                         68***********************************************95 PP
2K-box109.73.1e-36761733100
                K-box   3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenk 92 
                          ++s+ +++ ++a+ +qqe++kL+++i+ Lq+++Rhl+Ge+L+sL++keL+qLe++Le+++++iRskK+e+ll++ie+lqk+e el++e+ 
  Kaladp0065s0005.2.p  76 STSSANTTVTNAQFYQQESTKLRQQIHLLQNTNRHLMGESLGSLNVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREMELENETI 165
                          45555689999******************************************************************************* PP

                K-box  93 aLrkklee 100
                          +Lr+k++e
  Kaladp0065s0005.2.p 166 CLRAKVAE 173
                          *****986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MGRGKIEIKK IENPTNRQVT FCKRRNGLMK KAYELSVLCD AEIALMVFSN RGRLYEYSNN  60
NIKSTIERYK KAYSDSTSSA NTTVTNAQFY QQESTKLRQQ IHLLQNTNRH LMGESLGSLN  120
VKELKQLENR LERGITRIRS KKHEMLLAEI EYLQKREMEL ENETICLRAK VAEVERFQQA  180
NMEAANQEFN TIQAYVARNF FQPDLLQGAD DGSHVNHFTH PDKKIIRLG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09960.11e-101MIKC_MADS family protein