PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0065s0043.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NF-YB
Protein Properties Length: 78aa    MW: 8841.1 Da    PI: 8.8937
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0065s0043.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB93.22.4e-292761488
                NF-YB 14 srimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylk 88
                         +rimk vlP+nakisk+ake +qe ++efisfvtse+sdkc++++rkt+ngd+++ al +l f++  e+ + yl 
  Kaladp0065s0043.1.p  2 GRIMKLVLPQNAKISKAAKERMQEYATEFISFVTSETSDKCRKDNRKTVNGDNICRALNHLEFDNLGESPTRYLC 76
                         7****************************************************************9999888885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 78 aa     Download sequence    
MGRIMKLVLP QNAKISKAAK ERMQEYATEF ISFVTSETSD KCRKDNRKTV NGDNICRALN  60
HLEFDNLGES PTRYLCN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.11e-28NF-YB family protein