PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0066s0025.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GATA
Protein Properties Length: 148aa    MW: 16138.4 Da    PI: 9.1761
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0066s0025.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.21.1e-182155135
                 GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                         C+ Cgt+kTplWR gp g+k+LCnaCG++ rk+++
  Kaladp0066s0025.2.p 21 CVDCGTSKTPLWRGGPAGPKSLCNACGIRSRKRRR 55
                         ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
MVSGMMDDGS ECGGLASKKL CVDCGTSKTP LWRGGPAGPK SLCNACGIRS RKRRRALLES  60
TEADENKKKM IGKKMKHMIN SNSDSNGSHN SSSSSSSNNG HLECSRKDRL TAMWDILKPR  120
KVRMEELNEE QEAAVLLMAM SHGYDRC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15155RKRRR
25176RKRRRALLESTEADENKKKMIGKKMK
35273KRRRALLESTEADENKKKMIGK
45378RKRRRALLESTEADENKKKMIGKKMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.11e-21GATA family protein