PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0066s0078.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 297aa    MW: 33066.8 Da    PI: 6.2228
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0066s0078.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.55.7e-28128188158
                          ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
                 WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                          ++Dg+nWrKYGqK+++g+++pr+YYrCt++   gC ++k+v+rs+edp ++ +tY+g+H++
  Kaladp0066s0078.1.p 128 VEDGFNWRKYGQKDIQGANHPRGYYRCTHRqqaGCLATKHVQRSDEDPLLFYVTYRGKHTC 188
                          58***************************98999*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MVMSGGRQEE QIWENYSSKI IVSNEIQRGV EAAKSLRILL MHHHHLNLLS NSQLSSSAQV  60
LLEEIISSSE RALSILKSCC QPGDASVNNI ADCENIHNQQ VSKKRKSTMM KFTKQVRVSL  120
ETGFDGTVED GFNWRKYGQK DIQGANHPRG YYRCTHRQQA GCLATKHVQR SDEDPLLFYV  180
TYRGKHTCYP QSETPPLLLP NRAANRSDQH YQTTCTTNTK ADADVCLPPF PDDIYLLASS  240
SSLLPEDNVG HFDSAGCCFQ QDQNSPAGIS ESQVESCPDS DDGSHVSFDL SNYVLF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.13e-32WRKY family protein