PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0066s0082.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C3H
Protein Properties Length: 330aa    MW: 37495.6 Da    PI: 7.316
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0066s0082.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH38.22.5e-12191216126
                          --S---SGGGGTS--TTTTT-SS-SS CS
              zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                          y   +C+++ +tG+C yGd+CkF+H+
  Kaladp0066s0082.2.p 191 YQPDICKDYKETGYCGYGDSCKFMHD 216
                          67789********************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MSERKEQPDF AQQQPEPVCK FLKAPARNKN FRKRTHDDDG DEDEEKGVEN AAVNKRKQQK  60
DKGLSFSTGG LKHAADADNG GDAKQPIFQF ESSKEIQVQH DNKATATLET ETDFSRDARA  120
IRERVLKQAE EALKGKKKGE GDEKLYKGIH GYTDYKAGFR REHTISSEKA GGSHGPLRAS  180
AHIRVSARFD YQPDICKDYK ETGYCGYGDS CKFMHDRGDY KSGWQMEREW DEAEKERKRK  240
LALKALNSDE EDDEPSDEDD DEDGLPFACF ICRKSFVDPV VTTCKHYFCE HCALKHHSKN  300
KKCFVCNKPT LGIFNTAHEI RKRIASQGK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01350.11e-126C3H family protein