PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0067s0047.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 180aa    MW: 20220.7 Da    PI: 7.0304
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0067s0047.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.45.1e-181871356
                         --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                         +++++t++q++ Le+ F  n++++++ + +L+++l+L+ rq+ vW+qN+Ra++k
  Kaladp0067s0047.1.p 18 SKRRLTEDQIRLLETNFSFNKKLDQDLKYHLSQQLNLPPRQIAVWYQNKRARWK 71
                         56789************************************************9 PP
2HD-ZIP_I/II100.71.3e-3219109393
          HD-ZIP_I/II   3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                          krrl+++q++lLE++F+ ++kL+++ K +l+++L+l prq+avW+qn+RAR+kt+ +E+d++a+++++ +++++n++Le+eve+L+eel+
  Kaladp0067s0047.1.p  19 KRRLTEDQIRLLETNFSFNKKLDQDLKYHLSQQLNLPPRQIAVWYQNKRARWKTQAMESDHKAMQSKLASVMSHNRKLEREVEKLQEELD 108
                          9**************************************************************************************997 PP

          HD-ZIP_I/II  93 e 93 
                          +
  Kaladp0067s0047.1.p 109 Q 109
                          6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MDFLKWQDTE KPDSGKGSKR RLTEDQIRLL ETNFSFNKKL DQDLKYHLSQ QLNLPPRQIA  60
VWYQNKRARW KTQAMESDHK AMQSKLASVM SHNRKLEREV EKLQEELDQA RAMVHASSTS  120
VPAYSCAVST SGEDDGGSSF VDRSECCLDN ELYACVAGVE SRHQFLSVAG GFGAFGPSI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53980.11e-33HD-ZIP family protein