PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0067s0050.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

NAC

Protein Properties

Length: 347aa MW: 38378.1 Da PI: 8.8273

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0067s0050.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	106.3	3.8e-33	91	230	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.... 79 lp+G++F+Ptd+e+v ++L++k+ +++ ++++ ++ +i++++P++Lp v+++ +fF++ +k+y+tg+rk+r+++ Kaladp0067s0050.1.p 91 LPAGVKFDPTDQEIV-QHLEAKAVATHklhplIDEFIPtLEGEnGICYTHPEKLP-GVRKDGLIRHFFHRPSKAYTTGTRKRRKVSadee 178 799**********.77888865555476543332222443346******.555666677**************7444555 PP NAM 80 ..sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v+ +ge++g kk+Lv+y gr++k+ekt+Wvmh+y++ Kaladp0067s0050.1.p 179 ggETRWHKTGKTRPVFI-SGEVKGFKKILVLYtnYGRQRKPEKTNWVMHQYHI 230 44778********.999*******66589************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MTWRSSVPDS RVSVREIDLI VSPPPPLQFP PAQLLPPPSS AQTSTRDGKV NGREVVEGHG 60 DVKVREVSCP SCGRHVQIQD QGGFIQELPG LPAGVKFDPT DQEIVQHLEA KAVATHKLHP 120 LIDEFIPTLE GENGICYTHP EKLPGVRKDG LIRHFFHRPS KAYTTGTRKR RKVSADEEGG 180 ETRWHKTGKT RPVFISGEVK GFKKILVLYT NYGRQRKPEK TNWVMHQYHI GGSEEEKEGE 240 LVVSKVFYQT QPRQCGGGSV GKEISDSHSH EPTRTNQQQQ NVISSNDVGY VEFYTPGHHQ 300 YMMSYGGGSP HQLMQNGGFH GDGSPFIRLG GSASKESISG MAERRG*

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MTWRSSVPDS RVSVREIDLI VSPPPPLQFP PAQLLPPPSS AQTSTRDGKV NGREVVEGHG  60
DVKVREVSCP SCGRHVQIQD QGGFIQELPG LPAGVKFDPT DQEIVQHLEA KAVATHKLHP  120
LIDEFIPTLE GENGICYTHP EKLPGVRKDG LIRHFFHRPS KAYTTGTRKR RKVSADEEGG  180
ETRWHKTGKT RPVFISGEVK GFKKILVLYT NYGRQRKPEK TNWVMHQYHI GGSEEEKEGE  240
LVVSKVFYQT QPRQCGGGSV GKEISDSHSH EPTRTNQQQQ NVISSNDVGY VEFYTPGHHQ  300
YMMSYGGGSP HQLMQNGGFH GDGSPFIRLG GSASKESISG MAERRG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28470.1	1e-107	NAC family protein